Index

_

__getitem__() (history_utils.BaseSeries method) (history_utils.ShortListSeries method) __init__() (contact_tracing.ContactTracingPolicy method) (contact_tracing.CRLikePolicy method) (customised_policy.CustomPolicy method) (depo.Depo method) (eva_policy.CRLikeQuarantinePolicy method) (eva_policy.EvaQuarantinePolicy method) (eva_policy.QuarantinePolicy method) (info_spreader.Spreader method) (policy.Policy method) (school_policy.AlternateAndMondayPCR method) (school_policy.AlternateFreeMonday method) (school_policy.AlternatingPolicy method) (school_policy.BasicSchoolPolicy method) (simulation_engine.SimulationEngine method) (testing_policy.TestingPolicy method) (vaccination.Vaccination method) (wee_cold.WeeColdPolicy method) (wee_cold_sim.WeeColdPolicy method)

__len__() (history_utils.BaseSeries method) (history_utils.ShortListSeries method) __setitem__() (history_utils.BaseSeries method) __str__() (graph_gen.CSVGraphGenerator method)

A

A (graph_gen.GraphGenerator attribute) (light.LightGraph attribute) A_invalids (graph_gen.GraphGenerator attribute) A_valid (graph_gen.GraphGenerator attribute) ACTIVE (agent_info_models.Tipping attribute), [1] agent_based_network_model module agent_info_models module AlternateAndMondayPCR (class in school_policy) AlternateFreeMonday (class in school_policy)

AlternatingPolicy (class in school_policy) animate module append() (history_utils.ShortListSeries method) archive_active_edges() (in module prob_infection) as_aggregated_graph() (graph_gen.GraphGenerator method) as_dict_of_graphs() (graph_gen.GraphGenerator method) (graph_gen.RandomGraphGenerator method) as_multigraph() (graph_gen.GraphGenerator method) as_one_graph() (graph_gen.GraphGenerator method) asarray() (history_utils.BaseSeries method)

B

BaseEngine (class in engine) BaseSeries (class in history_utils) BasicSchoolPolicy (class in school_policy)

beta_increase() (customised_policy.CustomPolicy method) bloat() (history_utils.BaseSeries method) (history_utils.TimeSeries method) (history_utils.TransitionHistory method)

C

calc_propensities() (in module extended_network_model) change_states() (simulation_engine.SimulationEngine method) classes_from_quarantine() (school_policy.ClosePartPolicy method) classes_to_quarantine() (school_policy.ClosePartPolicy method) close() (pool.Pool method) close_layers() (graph_gen.GraphGenerator method) (light.LightGraph method) ClosePartPolicy (class in school_policy) closing_and_opening() (school_policy.AlternatingPolicy method) (school_policy.BasicSchoolPolicy method) cma_es() (in module search_methods) common_arguments (simulation_engine.SimulationEngine attribute) compute_mean_degree() (in module graph_utils) concat_lists() (in module light) config_utils module ConfigFile (class in config_utils) ConfigFileGenerator (class in config_utils) contact_tracing module

ContactTracingPolicy (class in contact_tracing) convert_class() (school_policy.ClosePartPolicy method) copy() (light.LightGraph method) (simple.SimpleGraph method) create_custom_model() (in module model) create_policy() (customised_policy.CustomPolicy method) CRLikePolicy (class in contact_tracing) CRLikeQuarantinePolicy (class in eva_policy) CSVGraphGenerator (class in graph_gen) current_N() (engine.BaseEngine method) (engine_seirspluslike.SeirsPlusLikeEngine method) (engine_sequential.SequentialEngine method) current_state_count() (engine.BaseEngine method) (engine_seirspluslike.SeirsPlusLikeEngine method) (engine_sequential.SequentialEngine method) custom_exponential_graph() (in module graph_gen) customised_policy module CustomPolicy (class in customised_policy)

D

D (states.STATES attribute), [1] D_d (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] D_u (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] daily_update() (agent_based_network_model.SimulationDrivenModel method) (agent_info_models.InfoSIRModel method) (agent_info_models.InfoTippingModel method) (agent_info_models.RumourModel method) (agent_info_models.RumourModelInfo method) (simulation_engine.SimulationEngine method) DailyEngine (class in engine_daily)

demo() (in module run_experiment) (in module run_multi_experiment) depo module Depo (class in depo) detected (extended_network_model.STATES attribute), [1] detected_active_counts() (in module eval_model) detected_node() (engine_sequential.SequentialEngine method) df_source_infection() (agent_based_network_model.SimulationDrivenModel method) df_source_nodes() (agent_based_network_model.SimulationDrivenModel method) dict2risk() (in module quarantine_coefs) die_or_not_to_die() (agent_based_network_model.SimulationDrivenModel method) do_testing() (eva_policy.QuarantinePolicy method) (school_policy.BasicSchoolPolicy method) draw_multi() (graph_gen.GraphGenerator method)

E

E (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] (states.STATES attribute), [1] E_d (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] e_dest (simple.SimpleGraph attribute) e_source (simple.SimpleGraph attribute) edge_repo (light.LightGraph attribute) engine module engine_daily module engine_m module engine_seirspluslike module engine_sequential module EngineM (class in engine_m) enter_test_procedure() (contact_tracing.ContactTracingPolicy method)

eva_policy module eval_model module evaluate_model() (in module run_multi_experiment) evaluate_with_params() (in module search_methods) EvaQuarantinePolicy (class in eva_policy) Exp2AQuarantinePolicy (class in contact_tracing) (class in eva_policy) Exp2BQuarantinePolicy (class in contact_tracing) (class in eva_policy) Exp2CQuarantinePolicy (class in contact_tracing) (class in eva_policy) EXT (agent_info_models.STATES attribute), [1] (agent_info_models.Tipping attribute), [1] (states.STATES attribute), [1] ext_code (agent_based_network_model.SimulationDrivenModel attribute) (agent_info_models.InfoSIRModel attribute) (agent_info_models.InfoTippingModel attribute) (agent_info_models.RumourModel attribute) (simulation_engine.SimulationEngine attribute) extended_network_model module

F

filter() (contact_tracing.ContactTracingPolicy method) filter_contact_history() (eva_policy.QuarantinePolicy method) filter_dead() (testing_policy.TestingPolicy method) filter_locked() (depo.Depo method) filter_locked_bitmap() (depo.Depo method) filter_out_ext() (contact_tracing.ContactTracingPolicy method) final_adjacency_matrix() (graph_gen.GraphGenerator method) (light.LightGraph method) final_states (agent_based_network_model.SimulationDrivenModel attribute) (agent_info_models.InfoSIRModel attribute) (agent_info_models.RumourModel attribute) (simulation_engine.SimulationEngine attribute) finalize() (history_utils.TimeSeries method) (history_utils.TransitionHistory method) finalize_data_series() (engine.BaseEngine method) (engine_seirspluslike.SeirsPlusLikeEngine method) (engine_sequential.SequentialEngine method)

first_day_setup() (contact_tracing.ContactTracingPolicy method) (info_spreader.Spreader method) (policy.Policy method) (school_policy.BasicSchoolPolicy method) (school_policy.ClosePartPolicy method) (testing_policy.TestingPolicy method) (vaccination.Vaccination method) fix_output_id() (config_utils.ConfigFile method) fixed_model_parameters (agent_based_network_model.SimulationDrivenModel attribute) (agent_info_models.InfoSIRModel attribute) (agent_info_models.RumourModel attribute) (agent_info_models.RumourModelInfo attribute) (simulation_engine.SimulationEngine attribute) flip_coin_for_external_edges() (agent_based_network_model.SimulationDrivenModel method) force_infect() (engine_sequential.SequentialEngine method)

G

G (graph_gen.GraphGenerator attribute) gen_tuple() (in module random_utils) gen_tuple1() (in module random_utils) gen_tuple2() (in module random_utils) get() (random_utils.RandomDuration method) get_all_edges_probs() (light.LightGraph method) get_attr_list() (graph_gen.GraphGenerator method) get_dead() (agent_based_network_model.SimulationDrivenModel method) get_edges() (light.LightGraph method) get_edges_for_node() (graph_gen.GraphGenerator method) get_edges_intensities() (light.LightGraph method) get_edges_nodes() (light.LightGraph method) get_edges_probs() (light.LightGraph method) get_graph_for_layer() (graph_gen.GraphGenerator method) get_last_day() (eva_policy.QuarantinePolicy method) (wee_cold.WeeColdPolicy method) get_layer_for_edge() (light.LightGraph method) get_layers_for_edge() (graph_gen.GraphGenerator method)

get_layers_info() (graph_gen.GraphGenerator method) get_nodes() (light.LightGraph method) get_nodes_edges() (light.LightGraph method) get_nodes_edges_on_layers() (light.LightGraph method) get_relevant_edges() (in module prob_infection) get_riskiness() (in module quarantine_coefs) get_state_count() (engine_sequential.SequentialEngine method) get_time_to_die() (agent_based_network_model.SimulationDrivenModel method) get_values() (history_utils.TimeSeries method) getAnswer() (pool.Pool method) global_configs module graph_gen module graph_utils module GraphGenerator (class in graph_gen) Graphs (graph_gen.GraphGenerator attribute)

H

history_utils module

hyperparam_utils module

I

I (agent_info_models.STATES attribute), [1] I_a (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] (states.STATES attribute), [1] I_da (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] I_dn (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] I_ds (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] I_n (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] (states.STATES attribute), [1] I_s (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] (states.STATES attribute), [1] increase_data_series_length() (engine.BaseEngine method) (engine_seirspluslike.SeirsPlusLikeEngine method) (engine_sequential.SequentialEngine method) increase_history_len() (engine.BaseEngine method) (engine_sequential.SequentialEngine method)

info_spreader module InfoSIRModel (class in agent_info_models) InfoTippingModel (class in agent_info_models) inicialization() (agent_based_network_model.SimulationDrivenModel method) (agent_info_models.InfoSIRModel method) (agent_info_models.RumourModel method) (engine.BaseEngine method) (engine_daily.DailyEngine method) (engine_seirspluslike.SeirsPlusLikeEngine method) (engine_sequential.SequentialEngine method) (simulation_engine.SimulationEngine method) init_deposit() (testing_policy.TestingPolicy method) invisible_states (agent_based_network_model.SimulationDrivenModel attribute) (agent_info_models.InfoSIRModel attribute) (agent_info_models.RumourModel attribute) (simulation_engine.SimulationEngine attribute) is_class_edge() (light.LightGraph method) is_family_edge() (light.LightGraph method) is_I_s() (wee_cold.WeeColdPolicy method) (wee_cold_sim.WeeColdPolicy method) is_locked() (depo.Depo method) is_pub_edge() (light.LightGraph method) is_quarantined (light.LightGraph attribute) is_super_edge() (light.LightGraph method)

J

J_dn (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] J_ds (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] J_n (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] (states.STATES attribute), [1]

J_s (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] (states.STATES attribute), [1]

L

layer_names (graph_gen.CSVGraphGenerator attribute) (graph_gen.GraphGenerator attribute) (romeo_juliet_graph_gen.RomeoAndJuliet attribute) layer_probs (graph_gen.CSVGraphGenerator attribute) (graph_gen.GraphGenerator attribute) (romeo_juliet_graph_gen.RomeoAndJuliet attribute) layer_types (graph_gen.GraphGenerator attribute) leaving_procedure() (contact_tracing.ContactTracingPolicy method) len() (history_utils.BaseSeries method)

light module LightGraph (class in light) load() (config_utils.ConfigFile method) (config_utils.ConfigFileGenerator method) load_config() (contact_tracing.ContactTracingPolicy method) load_gold_data() (in module run_search) load_scenario_dict() (in module policy_utils) lock_up() (depo.Depo method)

M

midnight() (engine_daily.DailyEngine method) MiniEvaQuarantinePolicy (class in contact_tracing) (class in eva_policy) model module model_m module model_mae() (in module eval_model) model_parameters (agent_based_network_model.SimulationDrivenModel attribute) (agent_info_models.InfoSIRModel attribute) (agent_info_models.InfoTippingModel attribute) (simulation_engine.SimulationEngine attribute) model_r_squared() (in module eval_model) model_rmse() (in module eval_model) model_zoo module modify_layers_for_nodes() (graph_gen.GraphGenerator method) (light.LightGraph method) module agent_based_network_model agent_info_models animate config_utils contact_tracing customised_policy depo engine engine_daily engine_m engine_seirspluslike engine_sequential eva_policy eval_model extended_network_model global_configs graph_gen graph_utils history_utils hyperparam_utils info_spreader light model model_m model_zoo plot_experiments plot_utils policy policy_utils pool preload_graph prob_infection quarantine_coefs random_utils romeo_juliet_graph_gen run_experiment run_multi_experiment run_search school_policy search_methods simple simulation_engine sparse_utils states testing_policy vaccination wee_cold wee_cold_sim

monitor() (in module global_configs) move_target_nodes_to_R() (agent_based_network_model.SimulationDrivenModel method) move_target_nodes_to_S() (agent_based_network_model.SimulationDrivenModel method) move_to_E() (agent_based_network_model.SimulationDrivenModel method) (engine_sequential.SequentialEngine method) move_to_R() (agent_based_network_model.SimulationDrivenModel method) (engine_sequential.SequentialEngine method) move_to_S() (vaccination.Vaccination method) multiply_col() (in module sparse_utils) multiply_row() (in module sparse_utils) multiply_zeros_as_ones() (in module sparse_utils)

N

node_degrees() (engine.BaseEngine method) (engine_m.EngineM method) (engine_seirspluslike.SeirsPlusLikeEngine method) nodes (graph_gen.GraphGenerator property) nodes_from_quarantine() (school_policy.BasicSchoolPolicy method) nodes_in_classes() (school_policy.ClosePartPolicy method) nodes_to_quarantine() (school_policy.BasicSchoolPolicy method) NoEvaQuarantinePolicy (class in contact_tracing) (class in eva_policy) not_implemented_yet() (in module model) num_contacts() (engine.BaseEngine method) (engine_seirspluslike.SeirsPlusLikeEngine method) num_nodes (simple.SimpleGraph attribute)

num_of_prisoners (depo.Depo property) num_states (agent_based_network_model.SimulationDrivenModel attribute) (agent_info_models.InfoSIRModel attribute) (agent_info_models.InfoTippingModel attribute) (agent_info_models.RumourModel attribute) (simulation_engine.SimulationEngine attribute) num_transitions (agent_based_network_model.SimulationDrivenModel attribute) (agent_info_models.InfoSIRModel attribute) (agent_info_models.InfoTippingModel attribute) (agent_info_models.RumourModel attribute) (simulation_engine.SimulationEngine attribute) number_of_nodes (light.LightGraph property) (simple.SimpleGraph property) number_of_nodes() (graph_gen.GraphGenerator method)

P

perform_gridsearch() (in module search_methods) perform_test() (testing_policy.TestingPolicy method) PickleGraphGenerator (class in graph_gen) plot_dfs() (in module plot_experiments) plot_experiments module plot_histories() (in module plot_utils) plot_history() (in module plot_utils) plot_mutliple_policies() (in module plot_utils) plot_mutliple_policies_everything() (in module plot_utils) plot_state_histogram() (in module plot_utils) plot_utils module policy module Policy (class in policy) policy_utils module pool module Pool (class in pool) preload_graph module

print() (engine.BaseEngine method) (engine_daily.DailyEngine method) (simulation_engine.SimulationEngine method) print_multi() (graph_gen.GraphGenerator method) prob_infection module prob_of_contact() (agent_info_models.InfoSIRModel method) (agent_info_models.RumourModel method) (agent_info_models.RumourModelInfo method) (engine_m.EngineM method) (engine_seirspluslike.SeirsPlusLikeEngine method) (in module prob_infection) prob_of_contact_old() (in module prob_infection) process_detected_nodes() (contact_tracing.ContactTracingPolicy method) (testing_policy.TestingPolicy method) process_vaccinated() (vaccination.Vaccination method) (vaccination.VaccinationToA method) (vaccination.VaccinationToR method) (vaccination.VaccinationToSA method) process_zip() (in module plot_experiments) prop_of_column() (in module sparse_utils) prop_of_row() (in module sparse_utils) propensities_recalc() (engine_daily.DailyEngine method) putQuerry() (pool.Pool method)

Q

quarantine_coefs module quarantine_nodes() (eva_policy.QuarantinePolicy method) (testing_policy.TestingPolicy method) (wee_cold.WeeColdPolicy method) (wee_cold_sim.WeeColdPolicy method)

quarantined_edges (graph_gen.GraphGenerator attribute) QuarantinePolicy (class in eva_policy)

R

R (agent_info_models.STATES attribute), [1] (states.STATES attribute), [1] R_d (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] R_u (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] rand() (random_utils.RandomGenerator method) random_seed (light.LightGraph attribute) (simple.SimpleGraph attribute) random_utils module RandomDuration (class in random_utils) RandomGenerator (class in random_utils) RandomGraphGenerator (class in graph_gen) RandomSingleGraphGenerator (class in graph_gen) read_csv() (light.LightGraph method) (simple.SimpleGraph method) read_picke() (graph_gen.GraphGenerator method) reconfig() (contact_tracing.CRLikePolicy method) recover_edges_for_nodes() (graph_gen.GraphGenerator method) (light.LightGraph method) release_nodes() (eva_policy.QuarantinePolicy method) (testing_policy.TestingPolicy method) (wee_cold.WeeColdPolicy method) (wee_cold_sim.WeeColdPolicy method) romeo_juliet_graph_gen module RomeoAndJuliet (class in romeo_juliet_graph_gen) RumourModel (class in agent_info_models) RumourModelInfo (class in agent_info_models)

run() (contact_tracing.ContactTracingPolicy method) (contact_tracing.CRLikePolicy method) (customised_policy.CustomPolicy method) (engine.BaseEngine method) (engine_daily.DailyEngine method) (engine_seirspluslike.SeirsPlusLikeEngine method) (engine_sequential.SequentialEngine method) (eva_policy.CRLikeQuarantinePolicy method) (eva_policy.EvaQuarantinePolicy method) (policy.Policy method) (school_policy.BasicSchoolPolicy method) (simulation_engine.SimulationEngine method) (testing_policy.TestingPolicy method) (vaccination.Vaccination method) (wee_cold.WeeColdPolicy method) (wee_cold_sim.WeeColdPolicy method) run_experiment module run_hyperparam_search() (in module hyperparam_utils) run_iteration() (agent_based_network_model.SimulationDrivenModel method) (agent_info_models.InfoSIRModel method) (agent_info_models.RumourModel method) (engine.BaseEngine method) (engine_daily.DailyEngine method) (engine_seirspluslike.SeirsPlusLikeEngine method) (engine_sequential.SequentialEngine method) (simulation_engine.SimulationEngine method) run_multi_experiment module run_search module run_single_model() (in module hyperparam_utils)

S

S (agent_info_models.STATES attribute), [1] (agent_info_models.Tipping attribute), [1] (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] (states.STATES attribute), [1] S_s (engine_m.STATES attribute), [1] (engine_sequential.STATES attribute), [1] (extended_network_model.STATES attribute), [1] (states.STATES attribute), [1] save() (config_utils.ConfigFile method) (engine.BaseEngine method) (engine_seirspluslike.SeirsPlusLikeEngine method) (history_utils.BaseSeries method) save_durations() (engine.BaseEngine method) (engine_sequential.SequentialEngine method) (simulation_engine.SimulationEngine method) save_node_states() (engine_sequential.SequentialEngine method) (simulation_engine.SimulationEngine method) save_to_zipped_csv() (in module run_multi_experiment) school_policy module search_methods module section_as_dict() (config_utils.ConfigFile method) SeirsPlusLikeEngine (class in engine_seirspluslike) select_active_edges() (in module prob_infection) select_contacts() (contact_tracing.ContactTracingPolicy method) (eva_policy.QuarantinePolicy method) select_test_candidates() (contact_tracing.ContactTracingPolicy method) (testing_policy.TestingPolicy method) SequentialEngine (class in engine_sequential) set_layer_weights() (light.LightGraph method) set_periodic_update() (engine.BaseEngine method) set_seed() (engine.BaseEngine method) setup_model_params() (engine.BaseEngine method) setup_series_and_time_keeping() (agent_based_network_model.SimulationDrivenModel method) (agent_info_models.InfoSIRModel method) (agent_info_models.RumourModel method) (engine.BaseEngine method) (engine_seirspluslike.SeirsPlusLikeEngine method) (simulation_engine.SimulationEngine method) ShortListSeries (class in history_utils) simple module

SimpleGraph (class in simple) simulation_engine module SimulationDrivenModel (class in agent_based_network_model) SimulationEngine (class in simulation_engine) sparse_utils module Spreader (class in info_spreader) state_str_dict (agent_based_network_model.SimulationDrivenModel attribute) (agent_info_models.InfoSIRModel attribute) (agent_info_models.InfoTippingModel attribute) (agent_info_models.RumourModel attribute) (simulation_engine.SimulationEngine attribute) states module states (agent_based_network_model.SimulationDrivenModel attribute) (agent_info_models.InfoSIRModel attribute) (agent_info_models.InfoTippingModel attribute) (agent_info_models.RumourModel attribute) STATES (class in agent_info_models) (class in engine_m) (class in engine_sequential) (class in extended_network_model) (class in states) states (simulation_engine.SimulationEngine attribute) states_and_counts_init() (agent_based_network_model.SimulationDrivenModel method) (agent_info_models.InfoSIRModel method) (agent_info_models.InfoTippingModel method) (agent_info_models.RumourModel method) (engine.BaseEngine method) (engine_seirspluslike.SeirsPlusLikeEngine method) (simulation_engine.SimulationEngine method) stop() (contact_tracing.ContactTracingPolicy method) (eva_policy.QuarantinePolicy method) (school_policy.BasicSchoolPolicy method) (testing_policy.TestingPolicy method) (vaccination.Vaccination method) (wee_cold.WeeColdPolicy method) (wee_cold_sim.WeeColdPolicy method) string_to_value() (in module config_utils) StrongEvaQuarantinePolicy (class in contact_tracing) (class in eva_policy) switch_off_edges() (light.LightGraph method) switch_off_superspread() (customised_policy.CustomPolicy method) switch_on_edges() (light.LightGraph method) switch_on_superspread() (customised_policy.CustomPolicy method)

T

testing_policy module TestingPolicy (class in testing_policy) tick() (eva_policy.QuarantinePolicy method) (testing_policy.TestingPolicy method) (wee_cold.WeeColdPolicy method) (wee_cold_sim.WeeColdPolicy method) tick_and_get_released() (depo.Depo method) TimeSeries (class in history_utils) Tipping (class in agent_info_models) to_df() (contact_tracing.ContactTracingPolicy method) (customised_policy.CustomPolicy method) (engine.BaseEngine method) (engine_sequential.SequentialEngine method) (eva_policy.QuarantinePolicy method) (policy.Policy method) (school_policy.BasicSchoolPolicy method) (simulation_engine.SimulationEngine method) (testing_policy.TestingPolicy method) (vaccination.Vaccination method) (wee_cold.WeeColdPolicy method) (wee_cold_sim.WeeColdPolicy method)

to_string() (config_utils.ConfigFile method) TransitionHistory (class in history_utils) transitions (agent_based_network_model.SimulationDrivenModel attribute) (agent_info_models.InfoSIRModel attribute) (agent_info_models.InfoTippingModel attribute) (agent_info_models.RumourModel attribute) (simulation_engine.SimulationEngine attribute)

U

unstable_states (agent_based_network_model.SimulationDrivenModel attribute) (agent_info_models.InfoSIRModel attribute) (agent_info_models.RumourModel attribute) (simulation_engine.SimulationEngine attribute) update_asymptomatic_rates() (vaccination.VaccinationToA method) update_beta() (customised_policy.CustomPolicy method) update_beta2() (customised_policy.CustomPolicy method) update_first_symptoms() (testing_policy.TestingPolicy method) update_graph() (engine.BaseEngine method) (engine_m.EngineM method) (simulation_engine.SimulationEngine method)

update_layers() (customised_policy.CustomPolicy method) update_plan() (agent_based_network_model.SimulationDrivenModel method) (agent_info_models.InfoSIRModel method) (agent_info_models.InfoTippingModel method) (agent_info_models.RumourModel method) (agent_info_models.RumourModelInfo method) (simulation_engine.SimulationEngine method) update_scenario_flags() (engine.BaseEngine method) (engine_seirspluslike.SeirsPlusLikeEngine method) update_states() (engine_daily.DailyEngine method) update_test_rate() (customised_policy.CustomPolicy method) update_theta() (customised_policy.CustomPolicy method)

V

vaccinate_old() (vaccination.Vaccination method) vaccinate_workers() (vaccination.Vaccination method) vaccination module

Vaccination (class in vaccination) VaccinationToA (class in vaccination) VaccinationToR (class in vaccination) VaccinationToSA (class in vaccination)

W

W10QuarantinePolicy (class in contact_tracing) (class in eva_policy) W20QuarantinePolicy (class in contact_tracing) (class in eva_policy) W30QuarantinePolicy (class in contact_tracing) (class in eva_policy) W40QuarantinePolicy (class in contact_tracing) (class in eva_policy) W60QuarantinePolicy (class in contact_tracing) (class in eva_policy)

W80QuarantinePolicy (class in contact_tracing) (class in eva_policy) wee_cold module wee_cold_sim module WeeColdPolicy (class in wee_cold) (class in wee_cold_sim) worker() (in module pool) write_pickle() (graph_gen.GraphGenerator method) write_to_csv() (romeo_juliet_graph_gen.RomeoAndJuliet method)